Halcones de Zapopan

In May 2020 the team began its registration to be part of the inaugural season of the Liga de Balompié Mexicano. On June 12 their incorporation into the new league was made official, in addition to announcing the Tres de Marzo Stadium as their stadium. On June 20, Jorge Hernández González was announced as the first team's manager. On July 18, Jesús Roberto Chávez was presented as the first player in the club's history.

On December 30, 2020, the team withdrew from the season due to financial problems, planning to come back next season as long as the league had adjustments in its structure and had financial stability, however, on January 12, 2021 the team left the LBM due to lack of compliance with the league board and announced their goal of seeking to join another competition.

On June 1, 2021, the club announced changes in its structure, the team was renamed Club Deportivo Zap and was relocated to Zapotlanejo, Jalisco, 45 km from its original location, this with the aim of obtaining its affiliation to the Liga Premier de México, affiliated with the Mexican Football Federation. On July 30, 2021, the team was confirmed as a member of the Serie A de México, being placed in Group 2.

On May 25, 2022, the club returned to its original name, Halcones de Zapopan.

In June 2024 the team was renamed Halcones F.C. after a change of ownership, in addition to being relocated to Querétaro City.

On August 20, 2024, the team won its first championship by being champion of the Copa Promesas MX, also being the first winner in the history of the competition.

On July 31, 2025 the team was relocated from Querétaro to Uruapan, Michoacán due to operational decisions.